| Pick
| Team
| Player
| Position
| School (Type)
| Hometown
| Notes
|
| 1 | Tampa Bay Devil Rays | Delmon Young | RF | Camarillo High School (HS) | Camarillo, CA |
|
| 2 | Milwaukee Brewers | Rickie Weeks | 2B | Southern University (Col.) | Daytona Beach, FL |
|
| 3 | Detroit Tigers | Kyle Sleeth | RHP | Wake Forest University (Col.) | Westminster, CO |
|
| 4 | San Diego Padres | Tim Stauffer | RHP | University of Richmond (Col.) | Saratoga Springs, NY |
|
| 5 | Kansas City Royals | Chris Lubanski | CF | Kennedy-Kenrick High School (HS) | Lansdale, PA |
|
| 6 | Chicago Cubs | Ryan Harvey | CF | Dunedin High School (HS) | Dunedin, FL |
|
| 7 | Baltimore Orioles | Nick Markakis | OF | Young-Harris College (Col.) | Woodstock, GA |
|
| 8 | Pittsburgh Pirates | Paul Maholm | LHP | Mississippi State University (Col.) | Greenwood, MS |
|
| 9 | Texas Rangers | John Danks | LHP | Round Rock High School (HS) | Round Rock, TX |
|
| 10 | Colorado Rockies | Ian Stewart | 3B | La Quinta High School (HS) | Westminster, CA |
|
| 11 | Cleveland Indians | Michael Aubrey | 1B | Tulane University (Col.) | Shreveport, LA |
|
| 12 | New York Mets | Lastings Milledge | CF | Lakewood Ranch High School (HS) | Bradenton, FL |
|
| 13 | Toronto Blue Jays | Aaron Hill | SS | Louisiana State University (Col.) | Visalia, CA |
|
| 14 | Cincinnati Reds | Ryan Wagner | RHP | University of Houston (Col.) | Yoakum, TX |
|
| 15 | Chicago White Sox | Brian Anderson | CF | University of Arizona (Col.) | Tucson, AZ |
|
| 16 | Florida Marlins | Jeffrey Allison | RHP | Veterans Memorial High School (HS) | Peabody, MA |
|
| 17 | Boston Red Sox | David Murphy | CF | Baylor University (Col.) | [[]] |
|
| 18 | Cleveland Indians | Bradley Snyder | RF | Ball State University (Col.) | [[]] | Compensation from Philadelphia Phillies for Jim Thome
|
| 19 | Arizona Diamondbacks | Conor Jackson | 3B | University of California (Col.) | Austin, TX | Compensation from Seattle Mariners for Greg Colbrunn
|
| 20 | Montreal Expos | Chad Cordero | RHP | California State-Fullerton (Col.) | Upland, CA |
|
| 21 | Minnesota Twins | Matt Moses | 3B | Mills Godwin High School (HS) | Richmond, VA |
|
| 22 | San Francisco Giants | David Aardsma | RHP | Rice University (Col.) | Denver, CO | Compensation from Houston Astros for Jeff Kent
|
| 23 | Anaheim Angels | Brandon Wood | SS | Horizon High School (HS) | Scottsdale, AZ |
|
| 24 | Los Angeles Dodgers | Chad Billingsley | RHP | Defiance High School (HS) | Defiance, OH |
|
| 25 | Oakland Athletics | Brad Sullivan | RHP | University of Houston (Col.) | [[]] | Compensation from San Francisco Giants for Ray Durham
|
| 26 | Oakland Athletics | Brian Snyder | 3B | Stetson University (Col.) | Flemington, NJ |
|
| 27 | New York Yankees | Eric Duncan | 3B | Seton Hall Prep High School (HS) | West Orange, NJ |
|
| 28 | St. Louis Cardinals | Daric Barton | C | Marina High School (HS) | Huntington Beach, CA |
|
| 29 | Arizona Diamondbacks | Carlos Quentin | OF | Stanford University (Col.) | [[]] |
|
| 30 | Kansas City Royals | Mitch Maier | C | University of Toledo (Col.) | [[]] | Compensation from Atlanta Braves for Roberto Hernandez
|
