| Pick
| Team
| Player
| Position
| School (Type)
| Hometown
| Notes
|
| 27 | Minnesota Twins | Scott Stahoviak | 3B | Creighton University (Col.) | [[]] | Compensation for Gary Gaetti
|
| 28 | St. Louis Cardinals | Tom McKinnon | RHP | David Starr Jordan High School (HS) | Long Beach, CA | Compensation for Terry Pendleton
|
| 29 | Houston Astros | Shawn Livsey | SS | Simeon High School (HS) | Chicago, IL | Compensation for Danny Darwin
|
| 30 | Kansas City Royals | Jason Pruitt | RHP | Rockingham County High School (HS) | Wentworth, NC | Compensation for Steve Farr
|
| 31 | San Diego Padres | Greg Anthony | RHP/OF | Tavares High School (HS) | Tavares, FL | Compensation for Jack Clark
|
| 32 | Detroit Tigers | Justin Thompson | LHP | Klein Oak High School (HS) | Spring, TX | Compensation for Jack Morris
|
| 33 | San Francisco Giants | Steve Whitaker | P | Long Beach State University (Col.) | [[]] | Compensation for Brett Butler
|
| 34 | California Angels | Jorge Fabregas | 3B/C | University of Miami (Col.) | [[]] | Compensation for Chili Davis
|
| 35 | Toronto Blue Jays | Jeff Ware | RHP | Old Dominion University (Col.) | [[]] | Compensation for George Bell
|
| 36 | New York Mets | Bobby Jones | RHP | Fresno State University (Col.) | [[]] | Compensation for Darryl Strawberry
|
| 37 | Boston Red Sox | J.J. Johnson | OF | Pine Plains High School (HS) | Pine Plains, NY | Compensation for Larry Andersen
|
| 38 | Oakland Athletics | Mike Rossiter | RHP | John Burroughs High School (HS) | Burbank, CA | Compensation for Willie McGee
|
| 39 | St. Louis Cardinals | Dan Cholowsky | 3B | University of California (Col.) | [[]] | Compensation for Ken Dayley
|
| 40 | Houston Astros | Jimmy Gonzalez | C | East Hartford High School (HS) | East Hartford, CT | Compensation for Dave Smith
|
| 41 | Detroit Tigers | Trever Miller | LHP | Trinity High School (HS) | Louisville, KY | Compensation for Mike Heath
|
| 42 | Toronto Blue Jays | Dante Powell | SS | Millikan High School (HS) | Long Beach, CA | Did not Sign/Compensation for Bud Black
|
| 43 | Boston Red Sox | Scott Hatteberg | C | Washington State University (Col.) | [[]] | Compensation for Mike Boddicker
|
| 44 | Houston Astros | Mike Groppuso | 3B | Seton Hall University (Col.) | [[]] | Compensation for Franklin Stubbs
|